单细胞测序技术-染色质可及性技术比较

scATAC-seq technical comparisons

单细胞测序技术

单细胞测序技术比较

scRNA-seq technical comparisons


Single cell isolation/capture

单细胞分离与捕获方法

Gene coverage

基因覆盖范围

参考资料链接
10x Chromium Single Cell 3'Droplet3‘端

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10x Chromium Single Cell 3' V1 GE

10x Chromium Single Cell 3' V2 and V3 GE

10x Chromium Single Cell 3' V3 FeatureBarcoding

10x Chromium Single Cell 5'Droplet5‘端

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10x Chromium Single Cell 5' GE

10x Chromium Single Cell 5' VDJ

BD Rhapsody
Nanowells
3‘端

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BD Rhapsody

SMART-seq/SMART-seq2/SMART-seq3FACS or Fluidigm C1全长

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SMART-seq family (including SMART-seq, SMART-seq2 and SMART-seq3)

Drop-seqDroplet3‘端

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Drop-seq / Seq-Well

Illumina Bio-Rad SureCell 3' WTADroplet3‘端点击跳转
inDrop
Droplet3‘端

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inDrop

MARS-seq/MARS-seq2.0
FACS3‘端
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CEL-seq/CEL-seq2
FACS3‘端

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CEL-seq family (including CEL-seq and CEL-seq2)

Quartz-seqFACS3‘端

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Quartz-seq family (including Quartz-seq and Quartz-seq2)

Quartz-seqFACS3‘端

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Quartz-seq family (including Quartz-seq and Quartz-seq2)

SCRB-seq/mcSCRB-seqFACS3‘端

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SCRB-seq / mcSCRB-seq

STRT-seq
FACS5‘端点击跳转
STRT-seq-2iFACS or dilution
5‘端点击跳转
Tang 2009
FACS or manual
3‘端

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Tang 2009

Microwell-seq
Nanowells3‘端

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Microwell-seq

Seq-Well
Nanowells3‘端点击跳转
Seq-Well S3
Nanowells3‘端

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Seq-Well S3

scifi-RNA-seqDroplet multiple cells
3‘端

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scifi-RNA-seq

sci-RNA-seq
Not needed
3‘端

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sci-RNA-seq

sci-RNA-seq3
Not needed3‘端

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sci-RNA-seq3

SPLiT-seq
Not needed3‘端

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SPLiT-seq

STRT-seq-C1Fluidigm C15‘端点击跳转